PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.ZUK60
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 149aa    MW: 16947.7 Da    PI: 4.9754
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.ZUK60genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR129.23.1e-0981141162
         FAR1   1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkktekerrtraetrtgC 62 
                  +fY +YAk+vGF +r+++++     k+++  +++ + Cs eg+re++ k+     +++  t++gC
  Aradu.ZUK60  81 EFYFNYAKKVGFVTRIRNTNFDktrKDSKIPINQSLHCSHEGYRESQVKA----ATQTFMTNVGC 141
                  6*************9998876645455666799*************9888....55555666666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.4E-681133IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MSMEQAIFEE ASYGTSYDDS DQYNSCDVNV PSLSKDDTQH VDKGKESGNI IQVEDNATAV  60
NHELPDHTGI PLDEIPYRAQ EFYFNYAKKV GFVTRIRNTN FDKTRKDSKI PINQSLHCSH  120
EGYRESQVKA ATQTFMTNVG CGFQYIFKV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.ZUK60
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020992158.11e-90protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444ZPS21e-76A0A444ZPS2_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14126217
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.22e-08FAR1 family protein