PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.ZVN9N

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 160aa MW: 18542.7 Da PI: 6.1387

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.ZVN9N	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	24.1	1.2e-07	53	97	1	47
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 kfY++Y+k +GFs+ +++++k+ ++ei ++ +Cs+eg+ +++ + Aradu.ZVN9N 53 KFYKDYSKVAGFSTGVRSTNKK--ENEINNQLITCSREGNGNQKYLR 97 6************9998877..7779*********99887554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	5.5E-5	53	97	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 160 aa Download sequence Send to blast
MDNSTSDCQL NQSEVDFETE SNGVPETFVC RSVIIGVCPQ GWMTFNTLED AAKFYKDYSK 60 VAGFSTGVRS TNKKENEINN QLITCSREGN GNQKYLRSRR QIPQLVVLHH SHPCCPYQAQ 120 MLKQYREVSM SVRHIIENNE DADLYENCHI WVPFYLDHHF

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.ZVN9N

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020997160.1	3e-44	protein FAR1-RELATED SEQUENCE 5-like
Refseq	XP_020997362.1	3e-44	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444XTL4	8e-61	A0A444XTL4_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477