PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araha.9917s0006.1.p

Organism

Arabidopsis halleri

Taxonomic ID

81970

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis

Family

bZIP

Protein Properties

Length: 725aa MW: 78500.2 Da PI: 6.2239

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araha.9917s0006.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	41.6	2.7e-13	227	288	1	62
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e++ k+ r+++NRe+A+ sRqRKk ++eeLeekv ++ + ++L +++ e a+l+++ Araha.9917s0006.1.p 227 EEDEKKKARLMRNRESAQLSRQRKKHYVEELEEKVRNMHSTITDLNGKISYFMAENATLRQQ 288 678899******************************************99999999999887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.5E-16	227	291	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.1E-11	228	289	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.3	229	289	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.75E-12	231	289	No hit	No description
Gene3D	G3DSA:1.20.5.170	5.8E-17	231	289	No hit	No description
CDD	cd14704	1.22E-21	232	283	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0042538	Biological Process	hyperosmotic salinity response
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0005783	Cellular Component	endoplasmic reticulum
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 725 aa Download sequence Send to blast
MAEPITEEQP PPPAPDPNST FPPPSDFDSI SIPPFDDHFY HSGSDHTPIG ELMSDLGFPD 60 GEFELTFDGM DDLYFPAENE SFLIPVNTSN QEQFGDFTPE SEGSGISGDC LVLPKDADKG 120 ITTSGCINRH SDDRCSGADR SLDLPTPLSS QGSGNCGSDV SVATNESSPK SRNVVVDQKV 180 KVEEAATTTS IITKRKKEID EDLTDESRNS KYRRSGEDAD ASAVTGEEDE KKKARLMRNR 240 ESAQLSRQRK KHYVEELEEK VRNMHSTITD LNGKISYFMA ENATLRQQLG GNGMCPPHLP 300 PPPMGMYPPM APMPYPWMPC PPYMVKQQGS QVPLIPIPRL KPQNPLGTSK AKKSESKKGE 360 AKTKKVASIS FLGLLFCLFL FGALAPIVNV NYGGISGAFY GNYRSNYITD QIYSQHRDRV 420 LDTSRSGAGT GVSNSNGMHC GRDSDRGARK NISATESSVP PGNGSEPLVA SLFVPRNDKL 480 VKIDGNLIIN SILASEKAVA SRKASESKER KADLVISKDY SPALPLPDVG MTEDMAKHLY 540 RSKAEKQKAL SSGSADTLKD QFKTKAANGE MQQWFREGVA GPMFSSGMCT EVFQFDVSST 600 SGAIIPASPA TNVSAEHGKN TTETDKQKNR RILRGLPIPL PGSDFNLTKE HQKNSSSKEI 660 KPASSMVVSV LVDPREGGDG DIDGMIGGPK SLSRVFVVVL LDSAKYVTYS CVLPRSGAPH 720 LVTT*

Sequence ? help Back to Top

Protein Sequence Length: 725 aa Download sequence Send to blast

MAEPITEEQP PPPAPDPNST FPPPSDFDSI SIPPFDDHFY HSGSDHTPIG ELMSDLGFPD  60
GEFELTFDGM DDLYFPAENE SFLIPVNTSN QEQFGDFTPE SEGSGISGDC LVLPKDADKG  120
ITTSGCINRH SDDRCSGADR SLDLPTPLSS QGSGNCGSDV SVATNESSPK SRNVVVDQKV  180
KVEEAATTTS IITKRKKEID EDLTDESRNS KYRRSGEDAD ASAVTGEEDE KKKARLMRNR  240
ESAQLSRQRK KHYVEELEEK VRNMHSTITD LNGKISYFMA ENATLRQQLG GNGMCPPHLP  300
PPPMGMYPPM APMPYPWMPC PPYMVKQQGS QVPLIPIPRL KPQNPLGTSK AKKSESKKGE  360
AKTKKVASIS FLGLLFCLFL FGALAPIVNV NYGGISGAFY GNYRSNYITD QIYSQHRDRV  420
LDTSRSGAGT GVSNSNGMHC GRDSDRGARK NISATESSVP PGNGSEPLVA SLFVPRNDKL  480
VKIDGNLIIN SILASEKAVA SRKASESKER KADLVISKDY SPALPLPDVG MTEDMAKHLY  540
RSKAEKQKAL SSGSADTLKD QFKTKAANGE MQQWFREGVA GPMFSSGMCT EVFQFDVSST  600
SGAIIPASPA TNVSAEHGKN TTETDKQKNR RILRGLPIPL PGSDFNLTKE HQKNSSSKEI  660
KPASSMVVSV LVDPREGGDG DIDGMIGGPK SLSRVFVVVL LDSAKYVTYS CVLPRSGAPH  720
LVTT*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator involved in salt and osmotic stress responses. Functions as a stress sensor and transducer in a signaling pathway that resembles an ER stress response. Following salt stress, BZIP17 is cleaved by SBT6.1 (S1P) and S2P at the C-terminus and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression of salt stress response genes (PubMed:17662035). Functions as a stress sensor and transducer in ER stress signaling pathway. ER stress induces proteolysis of BZIP17 by SBT6.1 (S1P) and S2P, and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones, as well as protein involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth (PubMed:20876872). {ECO:0000269\|PubMed:17662035, ECO:0000269\|PubMed:20876872}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araha.9917s0006.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AY136295	0.0	AY136295.1 Arabidopsis thaliana putative TGACG-sequence-specific bZIP DNA-binding protein (At2g40950) mRNA, complete cds.
GenBank	BT000408	0.0	BT000408.1 Arabidopsis thaliana putative TGACG-sequence-specific bZIP DNA-binding protein (At2g40950) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002881751.1	0.0	bZIP transcription factor 17
Swissprot	O22208	0.0	BZP17_ARATH; bZIP transcription factor 17
TrEMBL	D7LGH5	0.0	D7LGH5_ARALL; BZIP transcription factor family protein
STRING	scaffold_402899.1	0.0	(Arabidopsis lyrata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM8881	27	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40950.1	0.0	bZIP family protein

Link Out ? help Back to Top
Phytozome	Araha.9917s0006.1.p

Publications ? help Back to Top
Zhou SF, et al. Membrane-associated transcription factor peptidase, site-2 protease, antagonizes ABA signaling in Arabidopsis. New Phytol., 2015. 208(1): p. 188-97 [PMID:25919792] Sagor GH, et al. The polyamine spermine induces the unfolded protein response via the MAPK cascade in Arabidopsis. Front Plant Sci, 2015. 6: p. 687 [PMID:26442007] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] Kim JS,Yamaguchi-Shinozaki K,Shinozaki K ER-Anchored Transcription Factors bZIP17 and bZIP28 Regulate Root Elongation. Plant Physiol., 2018. 176(3): p. 2221-2230 [PMID:29367234] Cifuentes-Esquivel N, et al. bZIP17 regulates the expression of genes related to seed storage and germination, reducing seed susceptibility to osmotic stress. J. Cell. Biochem., 2018. 119(8): p. 6857-6868 [PMID:29693271] Guan P, et al. SENSITIVE TO SALT1, An Endoplasmic Reticulum-Localized Chaperone, Positively Regulates Salt Resistance. Plant Physiol., 2018. 178(3): p. 1390-1405 [PMID:30287478]