PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.0BU95
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 254aa    MW: 29612.5 Da    PI: 4.5546
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.0BU95genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.46.3e-17250355
          AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ykGVr +k +g+Wv+eIr p++   r r++lg+++t ++Aa+a +aa  +l+g
  Araip.0BU95  2 YKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDTQQKAARAFDAALYCLRG 50
                 9****999.**********933...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103221.983158IPR001471AP2/ERF domain
SMARTSM003802.7E-29164IPR001471AP2/ERF domain
CDDcd000182.53E-27260No hitNo description
PfamPF008473.0E-10250IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-19259IPR016177DNA-binding domain
PRINTSPR003675.6E-9213IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-28259IPR001471AP2/ERF domain
PRINTSPR003675.6E-92440IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MYKGVRKRKW GKWVSEIRLP NSRERIWLGS YDTQQKAARA FDAALYCLRG RHASFNFPDT  60
PLHLEINNVS HYHSLSHHEI QQVASKFANN FDAEEEEEPS SQNGANSASS VCDYDGSNNN  120
NNNDDNTNNN VQVDHGDMDW TFLNVLDDQN DSNFDNTIGY DFGLYYGGID KIREIRQKYD  180
MVTYLLEYID YPDQIPFGEG MSDVASSRDL RLLLDWCPEK GWTVPMPTDY LFYNGAFRFV  240
QVQYMSFLHN WFLE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-142581572Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
128KGVRKRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00151DAPTransfer from AT1G19210Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.0BU95
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016207850.11e-124ethylene-responsive transcription factor ERF016-like
RefseqXP_025659952.11e-124ethylene-responsive transcription factor ERF016-like
TrEMBLA0A445CWX41e-123A0A445CWX4_ARAHY; Uncharacterized protein
STRINGGLYMA14G12505.11e-56(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14793399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.13e-40ERF family protein