PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.0D160

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

G2-like

Protein Properties

Length: 217aa MW: 23704.1 Da PI: 11.4611

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.0D160	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	85.3	6.4e-27	2	52	2	52
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 prlrWtp+LH +F +av++LGG+e+AtPk +l+lm+v gL+++hvkSHLQ Araip.0D160 2 PRLRWTPNLHLSFSHAVQRLGGQERATPKLVLQLMNVRGLSIAHVKSHLQI 52 8*************************************************5 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	2.9E-23	1	51	IPR009057	Homeodomain-like
PROSITE profile	PS51294	9.3	1	58	IPR017930	Myb domain
SuperFamily	SSF46689	4.66E-11	2	52	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	6.3E-19	2	52	IPR006447	Myb domain, plants
Pfam	PF00249	4.3E-6	3	51	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.25.10.10	1.6E-4	86	147	IPR011989	Armadillo-like helical

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence Send to blast
MPRLRWTPNL HLSFSHAVQR LGGQERATPK LVLQLMNVRG LSIAHVKSHL QILKGSLLML 60 SLHCSRLLIL SMRRIHEGAS AAPKGSVNTS ESSSLVAAGG LDSLPREDIS GKITPTLLKS 120 LESPELKVRM ESIEAVNKIL EEANKRIQAN GTGIPTYKAA LTLLMVFGVG PTVFGIMSNI 180 HKLVRKKNGS MLRAFIALAL IKFKQPWLWS SSSKSKG

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	5e-16	3	51	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	5e-16	3	51	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	4e-16	3	51	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	4e-16	3	51	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	4e-16	3	51	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	4e-16	3	51	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	5e-16	3	51	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	5e-16	3	51	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	5e-16	3	51	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	5e-16	3	51	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	5e-16	3	51	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	5e-16	3	51	4	52	Protein PHOSPHATE STARVATION RESPONSE 1

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.0D160

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A445AT44	1e-139	A0A445AT44_ARAHY; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42660.1	3e-25	G2-like family protein