PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.0HI1A
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 395aa    MW: 42902.2 Da    PI: 7.1524
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.0HI1AgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.85.4e-052833211255
                  HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  Araip.0HI1A 283 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 321
                  7788899*********998.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.719271320IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.59E-11281334IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.11E-5281325No hitNo description
Gene3DG3DSA:4.10.280.107.8E-9285328IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MDPPPTILGL QISLCNHIQE DNNNNINIGV PLIQDHHHHL WTTTTTTTSS GDDNTAQPSC  60
LSLNTTNHIT INHNMLNSHH TPPPPSSTVE FSTHDDDKLL LKTFFSAQDF YSNTDTTTTT  120
TFCGVPSSSR RNFSHIYPTI NISNNINNHS SPSPSSSSNN MTSHSFDLPA FMTTTTHGGG  180
AAAHQQVDLG LATFSDNHLS FHLDHHHSQH HRPTHASSPP CSNSTTSTTA NNNSHPSQYF  240
SNGTVDTKRP CTSIMDTKAS QSLTASKKSR SESRPSCPPF KVRKEKLGDR IAALQQLVAP  300
FGKTDTASVL MEAIGYIKFL QSQVETLSVP YMKPTQNQTN SRMMQGVSTI GGGNGEPKQD  360
LRSRGLCLVP LSCMSYIAGD ASNDAWQQSN FGGAT
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.0HI1A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016167655.10.0transcription factor bHLH110-like isoform X1
RefseqXP_025668847.10.0transcription factor bHLH110 isoform X1
TrEMBLA0A445CC030.0A0A445CC03_ARAHY; Uncharacterized protein
STRINGVIT_18s0001g12970.t012e-73(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40453254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.11e-50bHLH family protein