PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.0T7XC
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 231aa    MW: 26076.2 Da    PI: 10.1117
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.0T7XCgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.95.5e-06931331055
                  HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  r+RR+++ ++   L++l+P++     kK++ a+  e+A  Y+k Lq
  Araip.0T7XC  93 RQRRQKLSEKTRCLQKLMPWD-----KKMDQATLFEQAYSYVKFLQ 133
                  9*******************9.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.21783132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.001189138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.07E-1091145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.2E-892140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.13E-592137No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MISMEPYSID PMFSGMSLQS LLNLNPSLLS FLTDHPPQPQ LPNHLTLHPT LEPYFNFIPK  60
RPRLTYSSCS SSSSSPPSSL RAKPLPPKSN FARQRRQKLS EKTRCLQKLM PWDKKMDQAT  120
LFEQAYSYVK FLQAQVSVLQ SMPYHAPPSP SFNNGGGCVF GFGDLERLNR NQLLQVLVNS  180
PVAQTVMSSK GLCVFSMEQL GLLTKLSERR LLLQNMNANM NMVSDSKPFF N
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.0T7XC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016167881.21e-167transcription factor bHLH117
RefseqXP_025672346.11e-167transcription factor bHLH117-like
TrEMBLA0A444Y6Q51e-164A0A444Y6Q5_ARAHY; Uncharacterized protein
STRINGXP_004487384.12e-59(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF134262124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.11e-17bHLH family protein