PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.0V0Z8
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 107aa    MW: 12140.5 Da    PI: 8.1084
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.0V0Z8genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR125.54.4e-0861101243
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkree 43 
                  +Y +Y k+vGF vrk+   +  ++g+  +r+f C+k g+r e
  Araip.0V0Z8  61 CYVSYIKSVGFGVRKRDAARA-KDGKYRRRRFFCNKAGHRGE 101
                  69**************99998.7888************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.4E-56199IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    Send to blast
MDIEGEATYF ESDEGGQNMK ETQENVSCIC ACRGSSRYCG VLTTEDIRNH SWMTSDAAYG  60
CYVSYIKSVG FGVRKRDAAR AKDGKYRRRR FFCNKAGHRG EILQQSE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17389RKRDAARAKDGKYRRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.0V0Z8
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025619919.12e-58protein FAR1-RELATED SEQUENCE 5 isoform X1
RefseqXP_025619920.12e-58protein FAR1-RELATED SEQUENCE 5 isoform X1
RefseqXP_025619921.12e-58protein FAR1-RELATED SEQUENCE 5 isoform X1
RefseqXP_025619922.12e-58protein FAR1-RELATED SEQUENCE 5 isoform X1
RefseqXP_029145020.12e-58protein FAR1-RELATED SEQUENCE 5 isoform X1
RefseqXP_029145021.12e-58protein FAR1-RELATED SEQUENCE 5 isoform X1
TrEMBLA0A445BGT71e-58A0A445BGT7_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1797925