PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.15LU1
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 373aa    MW: 43901.8 Da    PI: 9.9286
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.15LU1genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR132.42.9e-1056101147
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 
                  +f+ +Y+ ++GF vrk++s+k+  +++i + +fvC keg r+++k++
  Araip.15LU1  56 QFWIDYGGRMGFGVRKQYSNKN-ADEKILSLRFVCAKEGVRKSDKRD 101
                  699******************9.7777***************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.1E-756101IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
LVFLLTIKKE YFLIFFSFLF SFQDVQRFLN AQNMDVEFDW LPKLGKTFNT VEEACQFWID  60
YGGRMGFGVR KQYSNKNADE KILSLRFVCA KEGVRKSDKR DSLTALKNMR FMIFFGEHNH  120
PLHLSQTTHM LACQRKIFQV QAQEIELADD SGITQWTSFE LMRRQLCARE NIGYTRLDQK  180
NYLRTKRMRS MAYGEAGGLK FETFGILCCH AIKVLDVKDI KLLSDQYFLK RWTREAMSGL  240
VKDMYGRIVE EDTCLTSTQW FKQTCPKLVR TVTQASDCKE TRVFMEKAME ELSKKVDDIC  300
KLNLRLEINN DDSFLPIQCT NFQPLQVRGL KMRNGVRNFR RRPTSWVKKQ PKNKKKSQNS  360
STSQQQQQDK VEL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1340355RRPTSWVKKQPKNKKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.15LU1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020986514.13e-94protein FAR1-RELATED SEQUENCE 5-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF30451449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-08FAR1-related sequence 5