PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.17DMG
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 338aa    MW: 37099 Da    PI: 6.5015
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.17DMGgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.93.3e-31204262259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp++++itY++eHnh+
  Araip.17DMG 204 SDLWAWRKYGQKPIKGSPYPRGYYRCSSTkGCPARKQVERSRTDPNMLVITYTSEHNHS 262
                  699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081132.42198264IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.2E-31200264IPR003657WRKY domain
SuperFamilySSF1182901.57E-26202264IPR003657WRKY domain
SMARTSM007744.2E-38203263IPR003657WRKY domain
PfamPF031064.9E-26205261IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MDHYTLGGVM ENNNNNNNKE KYYQGDLSDI IRASYGYYGS YNSASSEASY MVEDPPMMAN  60
FGDPFSNSGG DPLLHDMPYF NTLSLGLEAA TCFGGSSSGD ACDDDDDDMK TPCIMTHHQI  120
SHPNPNLLLP ISTCQDSSST IMTVNNNSST KPSSAYCLVD NTGPVVVQIS APVNKRRKSQ  180
AKKSICIPAA AAPTSRQGGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS STKGCPARKQ  240
VERSRTDPNM LVITYTSEHN HSWPTQRNAL AGSSRSNTHP PSSSTKNTIT TTKPEEQQHS  300
NTDSNTALLA VKKEDIHNNN KLEDLFAELG QLERDYIC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B6e-24178265280Disease resistance protein RRS1
5w3x_D6e-24178265280Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.17DMG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150387e-41AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016193637.10.0probable WRKY transcription factor 35
RefseqXP_025639655.10.0probable WRKY transcription factor 35
TrEMBLA0A445DME40.0A0A445DME4_ARAHY; Uncharacterized protein
STRINGGLYMA08G08340.14e-89(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54303454
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.12e-60WRKY DNA-binding protein 35