PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.2412K
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 466aa    MW: 51642.3 Da    PI: 8.2031
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.2412KgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.84.6e-33194250360
                  -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
         WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                  DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers  d+++ ei+Y+geHnh+k
  Araip.2412K 194 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSF-DGQIAEIVYKGEHNHPK 250
                  9***************************************.***************85 PP
2WRKY1031.7e-32384441259
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                   Dg++WrKYGqK+vkg+++prsYYrCt  +C+v+k+ver+ +dp+++++tYeg+Hnhe
  Araip.2412K 384 GDGFRWRKYGQKVVKGNPYPRSYYRCTNVKCNVRKHVERAIDDPRAFVTTYEGKHNHE 441
                  59*******************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.8E-29183251IPR003657WRKY domain
SuperFamilySSF1182909.94E-26191251IPR003657WRKY domain
SMARTSM007743.2E-37192250IPR003657WRKY domain
PfamPF031061.1E-25194249IPR003657WRKY domain
PROSITE profilePS5081124.122194251IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.7E-33369443IPR003657WRKY domain
PROSITE profilePS5081134.222378443IPR003657WRKY domain
SuperFamilySSF1182902.75E-28378443IPR003657WRKY domain
SMARTSM007748.3E-38383442IPR003657WRKY domain
PfamPF031061.6E-25385441IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009957Biological Processepidermal cell fate specification
GO:0010214Biological Processseed coat development
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    Send to blast
MDIDEAERVV VAKPVASRPN CNTFRSFSEL LAGAINASSP QIESSQATVS AIRPKTVRFK  60
PALNRTPAPS VASQDDIFGA ALCDSSHKSP NSDTKQSLIY KPMAKLVSRT TVSLLANMGN  120
CSTIQQQSGQ SMEGGLHHIS HERFGTNLSS DLYHSHSITP PSETTEPCKM MQQNIEEDQK  180
ALTSAINCDR PSYDGYNWRK YGQKQVKGSE YPRSYYKCTH PNCPVKKKVE RSFDGQIAEI  240
VYKGEHNHPK PQPPKRSGTA GMQGSGMVPD GVAQDVWSNN HSERNDSRIE NQNDTGLPAN  300
SVYGVKVSQP NDSILNAYGV SPENSCGLSG ECEQGSKGFE AEEEESRSKR RRNESRSNEA  360
AVSEEALIEP RIVLQSSTDS EIIGDGFRWR KYGQKVVKGN PYPRSYYRCT NVKCNVRKHV  420
ERAIDDPRAF VTTYEGKHNH EMPIKNINPN VPSERDSQAS LSKDKP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-31194443877Probable WRKY transcription factor 4
2lex_A2e-31194443877Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.2412K
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016207944.10.0WRKY transcription factor 44
RefseqXP_016207945.10.0WRKY transcription factor 44
RefseqXP_016207946.10.0WRKY transcription factor 44
TrEMBLA0A444YNA20.0A0A444YNA2_ARAHY; Uncharacterized protein
STRINGGLYMA19G36100.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67903450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.19e-96WRKY family protein