PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.33UL3
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 83aa    MW: 9661.26 Da    PI: 10.4843
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.33UL3genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.72.5e-1214521455
          AP2 14 rWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 +W AeIrdp++     r++lg+f t +eAa+a+++  +k++g
  Araip.33UL3 14 KWMAEIRDPRK---GVRVWLGTFNTTKEAARAYDRECRKIHG 52
                 9*******954...4*******************99999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103215.448160IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.5E-221261IPR001471AP2/ERF domain
SuperFamilySSF541713.4E-161261IPR016177DNA-binding domain
PfamPF008471.1E-61345IPR001471AP2/ERF domain
SMARTSM003803.9E-161466IPR001471AP2/ERF domain
CDDcd000184.80E-201461No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    Send to blast
MVQFAIGKAC EEEKWMAEIR DPRKGVRVWL GTFNTTKEAA RAYDRECRKI HGKKVKVNFP  60
NKDDKHSIQQ SRNIILNLPP LPI
Functional Description ? help Back to Top
Source Description
UniProtProbable transcriptional activator that may be involved in defense signaling pathway. Binds in vitro to the DNA sequence 5'-AGCCGCC-3' of the GCC-box element found in pathogenesis-related (PR) gene promoters. The transcriptional activation is enhanced in vitro by the presence of MPK12/BWMK1. {ECO:0000269|PubMed:12913152}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.33UL3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJQ0489312e-59JQ048931.1 Arachis hypogaea ethylene-responsive element binding factor 4 (ERF4) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015968971.14e-33ethylene-responsive transcription factor RAP2-3
RefseqXP_020974167.12e-33LOW QUALITY PROTEIN: ethylene-responsive transcription factor RAP2-12-like
SwissprotQ6K7E62e-20ERF1_ORYSJ; Ethylene-responsive transcription factor 1
TrEMBLA0A444XTF58e-34A0A444XTF5_ARAHY; Uncharacterized protein
STRINGXP_007145186.17e-28(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2107434
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.11e-21ERF family protein
Publications ? help Back to Top
  1. Kim CY, et al.
    Identification of rice blast fungal elicitor-responsive genes by differential display analysis.
    Mol. Plant Microbe Interact., 2000. 13(4): p. 470-4
    [PMID:10755311]
  2. Koo SC, et al.
    OsBWMK1 mediates SA-dependent defense responses by activating the transcription factor OsWRKY33.
    Biochem. Biophys. Res. Commun., 2009. 387(2): p. 365-70
    [PMID:19607808]
  3. Iwamoto M,Takano M
    Phytochrome-regulated EBL1 contributes to ACO1 upregulation in rice.
    Biotechnol. Lett., 2011. 33(1): p. 173-8
    [PMID:20872166]
  4. Serra TS, et al.
    OsRMC, a negative regulator of salt stress response in rice, is regulated by two AP2/ERF transcription factors.
    Plant Mol. Biol., 2013. 82(4-5): p. 439-55
    [PMID:23703395]
  5. Jisha V, et al.
    Overexpression of an AP2/ERF Type Transcription Factor OsEREBP1 Confers Biotic and Abiotic Stress Tolerance in Rice.
    PLoS ONE, 2015. 10(6): p. e0127831
    [PMID:26035591]
  6. Lourenço TF, et al.
    The Rice E3-Ubiquitin Ligase HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE1 Modulates the Expression of ROOT MEANDER CURLING, a Gene Involved in Root Mechanosensing, through the Interaction with Two ETHYLENE-RESPONSE FACTOR Transcription Factors.
    Plant Physiol., 2015. 169(3): p. 2275-87
    [PMID:26381316]