PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.36Q9K
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 175aa    MW: 20204.4 Da    PI: 4.3963
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.36Q9KgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR145.42.7e-1499172173
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.d 73 
                  +fYn+Y+   GF +rk+   +  ++g+i++r++vC+keg r+ +  + ++++r+ r+ trt+C  +l+vk+++  
  Araip.36Q9K  99 QFYNAYSCWHGFVMRKDDVVRD-NQGRIISRQLVCNKEGWRNMRYLDmDDRSREARSLTRTKCPTRLRVKLDYgC 172
                  6****************99998.8888***************9998867888999***************98744 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.2E-1299170IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
CVGLGKGHLP PTPTVHFLSV EAQPLVVIKE DDVKNDSDND LGDDFDYQPN AEDDADDDDV  60
DSLDSTSKSE EVCGVKRIAD LMVEDIWNLD FRTEDEACQF YNAYSCWHGF VMRKDDVVRD  120
NQGRIISRQL VCNKEGWRNM RYLDMDDRSR EARSLTRTKC PTRLRVKLDY GCSRW
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.36Q9K
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371770.0HQ637177.1 Arachis hypogaea clone AHF-303L13 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025647266.11e-101protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444ZE001e-101A0A444ZE00_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9653634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-10FAR1-related sequence 5