PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.37BUF
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 596aa    MW: 66837.5 Da    PI: 6.7767
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.37BUFgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.55.6e-14406452455
                  HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                  +h   Er+RR+++N++f +Lr+++P+ +      K +K++iL  A+eY+++L+
  Araip.37BUF 406 NHALSERKRRAKLNERFLTLRSMVPTiS------KDDKVSILDDAMEYLRKLE 452
                  7999**********************66......****************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142158.1E-547190IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088816.177402451IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.96E-17404464IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.59E-13405456No hitNo description
PfamPF000101.9E-11406452IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-18406463IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.0E-14408457IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 596 aa     Download sequence    Send to blast
MVPEKVKKQL ALAVRSIQWS YAIFWSSSPT QPGVLSWGEG YYNGDIKTRK TSQVAEHNSD  60
QIISLQRSEQ LRELYSSLAD SKSCSQTKRP SAALSPEDLT DTEWFYLVCM SFVFNIGQGL  120
PGRSLAYGQP IWLCNAHSAD NGVFCRSLLA KSASIQTVVC FPFLDGVIEL GTTDPVSEDY  180
SLIQVIRNSF LDILETNLPN NPGANLNTRN KEEGGVACGE FDHNAYGLKL TPEVIGYELI  240
NITSPTTSSN ALQANQQTDG RTMFPTEFSN CFHNSRNSSD CLSENHCAQD LQQCNDNPKT  300
TLVNLGSDDK HYQRILSALP IRPDDDRLIM RVHLRNFRGE SSFAIWKQLG SMDCQRSRRG  360
GTPQNLLKKV LFEVPLMHMD GLLESQEKIG SKDRMRLLEV DDVGMNHALS ERKRRAKLNE  420
RFLTLRSMVP TISKDDKVSI LDDAMEYLRK LEEKVRKLEA EKDVTDLDGI VSTRTSQDMV  480
ERASDNNSNK NSKSVSNKRR ACEAAGDEEM NNSEIDVGIY VSESEVVIEM KCPWREGLLL  540
ETVEALSSLH LDCHSLQSSK AHGTLYLTIK SKFRGANNVA PVKRIRRTLQ KAAMKS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4rqw_A1e-181919024192Transcription factor MYC3
4rqw_B1e-181919024192Transcription factor MYC3
4rs9_A1e-181919024192Transcription factor MYC3
4yz6_A1e-181919024192Transcription factor MYC3
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.37BUF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016199261.10.0transcription factor EGL1-like isoform X1
RefseqXP_025653773.10.0transcription factor EGL1 isoform X1
TrEMBLA0A445D6740.0A0A445D674_ARAHY; Uncharacterized protein
STRINGGLYMA08G01810.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24443463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63650.31e-147bHLH family protein