PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.3A1VT
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 173aa    MW: 19426.7 Da    PI: 9.5543
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.3A1VTgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY34.63.9e-11140161122
                  ---SS-EEEEEEE--TT-SS-E CS
         WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                  ldDgy+WrKYGqK+vk+s +pr
  Araip.3A1VT 140 LDDGYKWRKYGQKVVKNSLHPR 161
                  59*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.5E-13125162IPR003657WRKY domain
SuperFamilySSF1182903.01E-10132163IPR003657WRKY domain
PROSITE profilePS5081112.84135164IPR003657WRKY domain
SMARTSM007744.2E-4140172IPR003657WRKY domain
PfamPF031064.6E-8141164IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MGFVHFEDHN QVLSFLTPSL AAPPTLSHHS LEDVRGGSNS ATNTIIAAAT TSTATATTTV  60
GFGHDELVPR ATWKNDDQVR SMDPKGMNNK NDENCTGNSS DGNNSSWWRN GGSEKGKVKV  120
RRKLREPRFC FQTRSDVDVL DDGYKWRKYG QKVVKNSLHP RYIFILLFNH FII
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1118124KVRRKLR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.3A1VT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150427e-49AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016172575.11e-105probable WRKY transcription factor 12, partial
TrEMBLA0A444XDK61e-103A0A444XDK6_ARAHY; Uncharacterized protein
STRINGGLYMA03G25770.13e-62(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF72943245
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44745.12e-27WRKY family protein