PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.3D3W2
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Dof
Protein Properties Length: 326aa    MW: 34170.3 Da    PI: 8.6601
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.3D3W2genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.92.6e-393995561
       zf-Dof  5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                 alkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk 
  Araip.3D3W2 39 ALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKL 95
                 789***************************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-253889IPR003851Zinc finger, Dof-type
PfamPF027012.3E-333994IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.4324094IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104278IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010052Biological Processguard cell differentiation
GO:0010118Biological Processstomatal movement
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:1902066Biological Processregulation of cell wall pectin metabolic process
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MIKEQAGGGG GGGSKKSTTS ASSATTSSQQ QEQQASVAAL KCPRCDSPNT KFCYYNNYSL  60
TQPRHFCKTC RRYWTKGGAL RNVPIGGGCR KNKKLNKSSR LLSSPSSDSP GFPYLLLLIF  120
XHPSSTIFNN NNHFASLLST TSSNAFNIDP NHSSVIGLNN YAFSTGLGGG GGCAIEGISS  180
AMNAHHHGSS NIASSIESLS SMNQDLHWKL QQQRLAMLFG GGGSGDDVNN NQQKDVAGGG  240
GGGELEKPQP ILFQNLDSSS INRKEENSVT APTEWFFGNS YPSVNPTPTT STGGGSGGGG  300
AAGNDNGMNW VGVGWGDVQH QYSALP
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.3D3W2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY5264003e-68AY526400.2 Arachis hypogaea clone PM644 microsatellite sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025651114.11e-144dof zinc finger protein DOF5.7-like
RefseqXP_025697770.11e-144dof zinc finger protein DOF5.7-like
TrEMBLA0A444WVV01e-143A0A444WVV0_ARAHY; Uncharacterized protein
STRINGGLYMA01G02610.22e-90(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF38543460
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37590.15e-31DNA binding with one finger 2.4