PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.3N31H
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 314aa    MW: 35054.9 Da    PI: 6.1922
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.3N31HgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR162.11.7e-19182270390
         FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  Y eYAk +GF v+k  s k  ++g+++++  +C+++g re+++ + ++++r ++a trt+C ak++v ++k +gkw+ ++++++HnH+l+
  Araip.3N31H 182 YVEYAKATGFAVQKGDSIKD-DEGNVVRKFSYCNRQGLREKKHYErADRKRAHKADTRTNCSAKFVVFLDKqSGKWRTKTFVQDHNHDLT 270
                  99**************9998.67779999999********99988577888899*************99999***************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031017.9E-18182270IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MNGVVNLSLL KSVVVCRGKI CCGLLSRHLL EIDQRRALVG GESGEKVWWV IGVVSGRRGL  60
EKAVWVELNI KVSEAAWRNG GSEGNSDFSG QWTDGWSSES EEEEEEVSKG LESPSRVCKD  120
SETVERVDVF GEGDDGGRMP SSESPRGSGN EMSDDVDTSM FSTAAALADA EFHRVEDAYA  180
RYVEYAKATG FAVQKGDSIK DDEGNVVRKF SYCNRQGLRE KKHYERADRK RAHKADTRTN  240
CSAKFVVFLD KQSGKWRTKT FVQDHNHDLT LPAFTNVMAA HRNINEGDKA HIHSMHEAGF  300
QTNQIMWFFA YLSG
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.3N31H
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025661956.11e-170protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444YSS91e-165A0A444YSS9_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1913225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-12FAR1-related sequence 5