PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.422ZX

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 169aa MW: 19623.9 Da PI: 10.3937

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.422ZX	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.3	1.2e-18	78	167	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 Y +YA+++GF++rk+ ++ ++g+ +r +v +++g+r++++ + + +r+ ++etrtg ka+ v ++k + kw+v++le+eHnH++ Araip.422ZX 78 AYGKYARDMGFTIRKRDLSRD-EDGNLNRRYYVFNRQGTRDPKHYRlVDGKRNYKPETRTGYKARCSVYLDKlSMKWRVKTLEEEHNHPMI 167 599************9998.8899************999967788999********************************996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	6.4E-16	78	168	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 169 aa Download sequence Send to blast
MASSSITIGV AVALTVRPLL LWKVTLWPSS HTSSIHLFPL ISKLLSGAVA AMMIAFPMRM 60 KILIKSAEFD EEVHAYKAYG KYARDMGFTI RKRDLSRDED GNLNRRYYVF NRQGTRDPKH 120 YRLVDGKRNY KPETRTGYKA RCSVYLDKLS MKWRVKTLEE EHNHPMIPE

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.422ZX

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025684808.1	2e-78	protein FAR-RED IMPAIRED RESPONSE 1-like
TrEMBL	A0A445DK06	4e-62	A0A445DK06_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF15343	2	10

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	3e-09	FAR1 family protein