PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.426A8
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HD-ZIP
Protein Properties Length: 138aa    MW: 15892.2 Da    PI: 9.6991
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.426A8genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox44.23.2e-144590654
                 S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
     Homeobox  6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54
                 +f++eq++     Fe+++++  +++ +LA+ lgL+ rqV++WFqNrRa+
  Araip.426A8 45 RFSDEQIR---CIFESESKLEPKKKIQLARDLGLQPRQVTIWFQNRRAR 90
                 67777765...57***********************************8 PP
2HD-ZIP_I/II73.34.6e-2441101164
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdye 64 
                  e+krr+s+eq++++   Fe+e+kLep++K +lar+Lglqprqv +WFqnrRAR+ + ++E + +
  Araip.426A8  41 ENKRRFSDEQIRCI---FESESKLEPKKKIQLARDLGLQPRQVTIWFQNRRARIWLVETEIQIH 101
                  58*********985...999*********************************99999987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466896.27E-133190IPR009057Homeodomain-like
SMARTSM003892.4E-84098IPR001356Homeobox domain
CDDcd000862.93E-114392No hitNo description
PfamPF000461.2E-114490IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.609.8E-145391IPR009057Homeodomain-like
PROSITE profilePS5007112.4385594IPR001356Homeobox domain
PRINTSPR000316.3E-66574IPR000047Helix-turn-helix motif
PRINTSPR000316.3E-67490IPR000047Helix-turn-helix motif
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    Send to blast
MMDGDDEFIQ ASKGKNVESF TCSEVALPQN KNSKKKKSKI ENKRRFSDEQ IRCIFESESK  60
LEPKKKIQLA RDLGLQPRQV TIWFQNRRAR IWLVETEIQI HMMPTPGVPR SCTQQANEPS  120
NTTSHGVQSD PSYLITLL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription activator that may act as growth regulators in response to water deficit. {ECO:0000269|PubMed:15604708, ECO:0000269|PubMed:8771791}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.426A8
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By water deficit, by abscisic acid (ABA) and by salt stress. {ECO:0000269|PubMed:16055682, ECO:0000269|PubMed:8771791}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029151796.17e-53homeobox-leucine zipper protein HOX19 isoform X5
SwissprotP468973e-20ATHB7_ARATH; Homeobox-leucine zipper protein ATHB-7
TrEMBLA0A444XMN87e-58A0A444XMN8_ARAHY; Uncharacterized protein
TrEMBLA0A444XMV62e-58A0A444XMV6_ARAHY; Uncharacterized protein
STRINGXP_007136490.15e-35(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120052635
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.24e-22homeobox 7
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Zhou SF, et al.
    Membrane-associated transcription factor peptidase, site-2 protease, antagonizes ABA signaling in Arabidopsis.
    New Phytol., 2015. 208(1): p. 188-97
    [PMID:25919792]