PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.438GZ
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 320aa    MW: 35561 Da    PI: 10.1392
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.438GZgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.65.1e-0982119850
                  HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHH CS
          HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveY 50 
                   E++RR+++N ++  Lr+++P++     +K++ a+++  A+eY
  Araip.438GZ  82 TEKQRREQLNGKYKILRSVIPSP-----TKMDRASVVGDAIEY 119
                  6**********************.....9*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.6374123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.6E-580131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.23E-980119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-781119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-682119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.28E-883121No hitNo description
PfamPF102252.6E-8250282IPR019358NEMP family
SuperFamilySSF821991.8E-7276309No hitNo description
Gene3DG3DSA:2.170.270.108.9E-7278310No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MLSRKFLTKN TTRRGTIAPA ENDRLQTLVF KFGVAKSIHH AMFCDNRRFV DFRCATPASS  60
RFANNNNNND ALEGDVDFSI VTEKQRREQL NGKYKILRSV IPSPTKMDRA SVVGDAIEYN  120
KGAAQNGLNQ NSTLQLSRGF SVGKSPGSKP GVAVVVERVR IHGLSRFRNL SKFAHSMKVK  180
VLPADPNIRI PNIEICFHRA ILCVLFRNAS LAIGMCSQGQ WEKVTKGSWV RSMSPFDHKL  240
LDIRTASSTL ASFLSKSLAF YYSSAMAVGI ILVILMILYQ TEHCGWGVEA AETIYKDEFI  300
IEYIGEGVGS ESERMVLGVA
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.438GZ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.33e-09bHLH family protein