PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.4KG33

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 244aa MW: 26939.1 Da PI: 8.5327

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.4KG33	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	24.1	1.2e-07	52	98	1	49
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkkte 49 kfY++YAk vGFs+r+++++k+ +ei+++ +Cs + k + + ++te Araip.4KG33 52 KFYKDYAKVVGFSTRVRSTNKK--GNEIKNQLITCSIKKKWKLKISSTE 98 6**************98887..8889******9998888777633 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	8.0E-5	52	96	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence Send to blast
MGEPCLGVNQ EYLGVFQECL DLYLHSIQIY GVDEQFVSKI GMTFNTLKDA AKFYKDYAKV 60 VGFSTRVRST NKKGNEIKNQ LITCSIKKKW KLKISSTEKT NPSAGFEKRD ARVNASSPPL 120 PCLPYYNDTN AAFDFLGSLR GKPTYPHKVP TIITTRIIST ISINTFPCPE GQTYSQTCEG 180 PNGTQCLPLI LEIPKRRTMA RVIESLVCAL PSRTAPDLGN GNCVHCGNGC DEKLLPPPPD 240 LPPC

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.4KG33

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477