PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.4MR76
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 462aa    MW: 50314.9 Da    PI: 7.5493
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.4MR76genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY83.81.6e-26267320254
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYeg 54 
                  +Dg++WrKYGqK+ kg++ pr+YYrCt+a gCpv+k+v+r+aed +v+++tYe 
  Araip.4MR76 267 SDGCQWRKYGQKMAKGNPSPRAYYRCTMAaGCPVRKQVQRCAEDSTVLITTYEA 320
                  7***************************99**********************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.0E-28251320IPR003657WRKY domain
SuperFamilySSF1182904.32E-23259320IPR003657WRKY domain
PROSITE profilePS5081125.43261327IPR003657WRKY domain
SMARTSM007743.4E-28266323IPR003657WRKY domain
PfamPF031061.2E-22268320IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    Send to blast
MDNPHPRELT FLPSRDVKEV DFFSSSSSTA ADHHRHGTTT NNASSFPHHP VNTGLNLTCA  60
TTGISTSKGS PNAENTESER KMVEGELRRL QEENRKLRSM VDQIAKSYSQ LQAQLFMALQ  120
KQKLTHHQNT GVKSNGMISG EKAVEGDGRA KVEMKNNDAS VSGDEKRERE VSASNNNGNN  180
AEEVMSKKHD ENDDHNEDDE DRLTKLHLGK QVAASATEED VLERSSSQSW GSCKTPNLEE  240
TKLPSSDLPF RKARVSVRAR SEAPLISDGC QWRKYGQKMA KGNPSPRAYY RCTMAAGCPV  300
RKQVQRCAED STVLITTYEA SAPFPTITLD LTHNHHNALQ LHRVVPPPGV TFPLPLHAVT  360
PPHQLIAGHP FLISHHQKLM PPLVHRQQPQ PSNNSPSMVE TVSAAIASDP NFTAAVAAAL  420
SSIIGSSNNG GSASTVIHPN AISVSPNGSP QLPQSCTTYS TN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-18256320770Probable WRKY transcription factor 4
2lex_A5e-18256320770Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.4MR76
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016205681.10.0probable WRKY transcription factor 47 isoform X2
TrEMBLA0A445CMY30.0A0A445CMY3_ARAHY; Uncharacterized protein
STRINGXP_007163249.11e-134(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF104392541
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.15e-42WRKY family protein