PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.4T95H

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 219aa MW: 24919.3 Da PI: 5.2303

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.4T95H	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.7	1.1e-24	89	179	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 fY++Y++ GF +r+ k+ k+ ++gei+++t+ C+++g+r+++ + ++++r+++++tr+gC a++++k + +g w+v++++ +HnH+l p Araip.4T95H 89 FYEQYSRAKGFAMRQGKKLKN-KKGEIVRYTYLCNRKGFRNKKWLEmQDRKREHKVVTRCGCLAEMRIKPKGdSGIWYVSRFVDDHNHDLLP 179 ***************9999.6777***********998875778888999*********9998**************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.6E-22	89	179	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence Send to blast
MFEMGSCSGT VSEFEIGGVE PVGGLGGSGE WLCDTLESSL DIGMEAEEKE GEPLEDRDEE 60 DNGISEPVMY SAAEILEMKF NNPDEASHFY EQYSRAKGFA MRQGKKLKNK KGEIVRYTYL 120 CNRKGFRNKK WLEMQDRKRE HKVVTRCGCL AEMRIKPKGD SGIWYVSRFV DDHNHDLLPA 180 KFVPYLPSYW KISDVDLAHM NSLRQVGISI PKIYESIAA

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.4T95H

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025663526.1	1e-164	protein FAR1-RELATED SEQUENCE 5-like isoform X2
TrEMBL	A0A444YQS4	1e-160	A0A444YQS4_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF9185	2	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	3e-18	FAR1-related sequence 10