PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.4WN3Z
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 132aa    MW: 15521.8 Da    PI: 7.6013
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.4WN3ZgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR132.23.4e-10471013889
         FAR1  38 egkreeekkk..tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                  eg+r++++++  ++ +r++++etr++C a++ v+ +  +g+  +  ++ eHnH++
  Araip.4WN3Z  47 EGFRDPRSENdtHRPKRKPKSETRCECLAEMCVHVHVeSGRLIILYFQDEHNHDM 101
                  7899888888666788999***************9998***************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.4E-747102IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    Send to blast
FVTTIIVVRT ELVIESIRLL DQTVAFFFYQ YYSKMNSLER IGLEGMEGFR DPRSENDTHR  60
PKRKPKSETR CECLAEMCVH VHVESGRLII LYFQDEHNHD MLDDSLTFTL PGHRKTNDAV  120
INKINFTTKK RV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16066PKRKPKS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.4WN3Z
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020991221.16e-33protein FAR1-RELATED SEQUENCE 5-like isoform X1
TrEMBLA0A445AJY72e-40A0A445AJY7_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3613639