PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.5012K
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Nin-like
Protein Properties Length: 179aa    MW: 19935.9 Da    PI: 9.7419
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.5012KgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK39.21.3e-12123158338
       RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRq 38 
                  ++i+l dl kyF+ pi +A ++L+++lTvLKr+CR 
  Araip.5012K 123 AKITLPDLVKYFDVPIVEALRNLNIGLTVLKRKCRW 158
                  79*********************************5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS515199.67107179IPR003035RWP-RK domain
PfamPF020421.3E-8124159IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
KKKNPVPPTK TFSDGTIGSA AAAAHGTTLV VYLHFFANII QIICKLELKT EVKDDLLDSS  60
KEESQKNSDG HQSSQEVLPV FNQDLNCRPL DENTTELIDK KTNVESLPGF GAKKRRAQSD  120
HIAKITLPDL VKYFDVPIVE ALRNLNIGLT VLKRKCRWSK VAKRRLSLLG DDHAMTKSI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.5012K
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020972690.12e-77protein RKD5-like
TrEMBLA0A444WUW34e-67A0A444WUW3_ARAHY; Uncharacterized protein
TrEMBLA0A444WV064e-63A0A444WV06_ARAHY; Uncharacterized protein
STRINGGLYMA01G36360.11e-34(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF96463042
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.12e-15RWP-RK domain-containing protein