PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.50M3R
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 398aa    MW: 44469.3 Da    PI: 6.5577
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.50M3RgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.32.1e-30223282159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+ +d +++++tYeg+Hnh+
  Araip.50M3R 223 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLDDMSILITTYEGTHNHP 282
                  58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-32208284IPR003657WRKY domain
SuperFamilySSF1182901.57E-27217284IPR003657WRKY domain
PROSITE profilePS5081129.103218284IPR003657WRKY domain
SMARTSM007742.0E-37223283IPR003657WRKY domain
PfamPF031061.9E-27224282IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MKTDLSLHID AEQEQENKQE DDVDVDVEEE MKQTQLQLEA GEIEEDVVSL QDNKNYKTRE  60
QEEDLNVLQM EMDRIKEENK ALRKLVEQTM KDYYDLQMKI SNNYNNKHIK DLEISVQRAS  120
PTIHDDDDEL SLSLRLNNTS STSWRIHQQG RVTDNIINEK LISSFASSSS SASLQNKLII  180
RGTTHDDTAI TTHHHNLSAA ASTTTPNRKP RVSVRARCEE AKMNDGCQWR KYGQKIAKGN  240
PCPRAYYRCT VAPGCPVRKQ VQRCLDDMSI LITTYEGTHN HPLPVGATAM AATASAPASF  300
ALSHGVSASQ PHFPWITNNN ININNNNVSA IASDPNKFKV AVAAAITTLF TNNNNKESHH  360
HHHGGNVANS SLFATAGTSN NNTSNWIIES LSRNVKPN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-222232861476WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.50M3R
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by potassium deprivation. {ECO:0000269|PubMed:15173595}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016179274.10.0probable WRKY transcription factor 9 isoform X1
RefseqXP_025686087.10.0probable WRKY transcription factor 9 isoform X1
SwissprotQ9C9F08e-68WRKY9_ARATH; Probable WRKY transcription factor 9
TrEMBLA0A444WZH50.0A0A444WZH5_ARAHY; Uncharacterized protein
STRINGXP_007159029.13e-88(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF93203141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.18e-54WRKY DNA-binding protein 9