PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.510K0
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 222aa    MW: 25396.3 Da    PI: 10.8532
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.510K0genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.23.9e-104490354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 ++h+++E+rRR riN+ +e L+ l  +      +K +Ka+ L+ ++e +k+L
  Araip.510K0 44 VKHSQAEKRRRMRINTQYEALKNLFQNK-----TKTDKASLLTTTIEIVKNL 90
                 58**********************9988.....9***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.22E-103492IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.04E-63992No hitNo description
PROSITE profilePS5088812.8624190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.8E-74490IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.1E-944100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.3E-44796IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS516719.155145222IPR002912ACT domain
SuperFamilySSF550215.04E-6147209No hitNo description
CDDcd048731.46E-5147211No hitNo description
Gene3DG3DSA:3.30.70.2601.1E-5147209No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MGMQRVRNHY YSGAQILRSS SITPYDYIFT KPRSKAADKK QAAVKHSQAE KRRRMRINTQ  60
YEALKNLFQN KTKTDKASLL TTTIEIVKNL RKNSIPQEAS SSSKKEMNKV TNQKKMQEAC  120
SPRNDDVFPS WEDKWSLKHE EGLMKATLSC EDKPGLMSTI AKAMGSVEAK VVKAEMVNVG  180
GRTRVVLWVK DSNGDRKGEE ILKRTLSTLM QRPVPKKRRF TQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.510K0
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020978364.11e-163transcription factor bHLH131
TrEMBLA0A444WW391e-159A0A444WW39_ARAHY; Uncharacterized protein
STRINGXP_004489760.17e-57(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126113032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.18e-30bHLH family protein