PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.58W0H
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 168aa    MW: 19469.4 Da    PI: 9.6563
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.58W0HgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR157.83.7e-1838124191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  kfY++YAk +GFs+r+  ++++   +ei+++  +Cs+egk +++ +    +++t+++   +C a++ ++  k  g w ++k++l+H+H+++p
  Araip.58W0H  38 KFYRNYAKAAGFSTRVWCTNRK--GNEIKNQLITCSREGKWKSKISP---TEKTNPTAGLNCPARIYIHTLKdVGAWIISKVVLDHSHPCCP 124
                  6***************987776..888**************998877...8999**************998879***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.8E-1538124IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MNNVRIKLVK GRNNPIFVDD ELVPKVGMTF TTLKDAEKFY RNYAKAAGFS TRVWCTNRKG  60
NEIKNQLITC SREGKWKSKI SPTEKTNPTA GLNCPARIYI HTLKDVGAWI ISKVVLDHSH  120
PCCPSKAEML KQHRELSMSI RRTIENNEEA DLYEDRHIWV PIYLDHHF
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.58W0H
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371781e-175HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020982377.18e-94protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444ZDY11e-100A0A444ZDY1_ARAHY; Uncharacterized protein
TrEMBLA0A445A1M91e-100A0A445A1M9_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.13e-11FAR1-related sequence 4