PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.592E0

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 218aa MW: 24876.1 Da PI: 6.8761

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.592E0	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.1	1.2e-17	85	174	1	89
FAR1 1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fY +YAk+vGF +++++++ k+++ +++ +C++eg+re++ + + r + t t C+ ++ v ++k ++ w+v++lel H+H++ Araip.592E0 85 QFYANYAKKVGFVTKIRNTNFDktwKESKIPVNQSIYCTREGYRESRVNV---ATRANRITATRCRTRMYVVLDKeKESWVVSRLELRHSHPC 174 6**********99998887756778888899*********9877...8899999********99999************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	5.5E-15	85	175	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence Send to blast
MAFSTPEGGS ISTLINPTQG DEQFSAGEIV IQEQEGSKVD EITDVVMTRK DELDYGHELP 60 DHSAIGEEEI SVIGMSFGSL PLAQQFYANY AKKVGFVTKI RNTNFDKTWK ESKIPVNQSI 120 YCTREGYRES RVNVATRANR ITATRCRTRM YVVLDKEKES WVVSRLELRH SHPCSAKKAV 180 HYHEYRELTI HAKCVITDND EAEIRPNKTY LALQMRLV

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.592E0

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025670217.1	1e-135	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445DQ97	1e-139	A0A445DQ97_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF23567	2	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	1e-09	FAR1 family protein