PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.5KN79
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 75aa    MW: 9065.26 Da    PI: 9.7272
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.5KN79genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.92.6e-093873440
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40
                     WT +E++l+++++++lG+  W +I+++  k+Rt  q+
      Araip.5KN79 38 WTLQEHKLFLQGFEELGKQ-WLRISNEYVKTRTYTQV 73
                     *****************99.************98776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.0963075IPR017930Myb domain
SuperFamilySSF466898.97E-93773IPR009057Homeodomain-like
CDDcd001670.003223873No hitNo description
PfamPF002493.5E-73873IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.3E-63873IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    Send to blast
MSGAKREQNR HTNINIIQHE PLPMASNDNN ERKKIFHWTL QEHKLFLQGF EELGKQWLRI  60
SNEYVKTRTY TQVEL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.5KN79
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025616409.16e-16uncharacterized protein LOC112708481
TrEMBLA0A444YUQ53e-35A0A444YUQ5_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.15e-12MYB_related family protein