PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.5S8T1

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 209aa MW: 23723 Da PI: 8.8627

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.5S8T1	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	60.1	6.7e-19	51	137	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 kfY++YAk +GFs+r+++++++ +ei+++ +Cs+egk +++ + +++t+++ +C a+l ++ k g w ++k++l+H+H+++p Araip.5S8T1 51 KFYRNYAKATGFSTRVRSTNRK--GNEIKNQLITCSREGKWKSKISP---TEKTNPTAGLNCPARLYIHTLKnVGAWIISKVVLDHSHPCCP 137 6**************98887..8889*********998877...8999**********998879*************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.7E-16	51	137	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence Send to blast
MDDSTSDCQL NQGEVDYEFE SNEVPEPLSV VDDQFVSKVG MTFTTLEDAE KFYRNYAKAT 60 GFSTRVRSTN RKGNEIKNQL ITCSREGKWK SKISPTEKTN PTAGLNCPAR LYIHTLKNVG 120 AWIISKVVLD HSHPCCPSKA EMLKQHRELS MSICRTIENN EEAAGSKQRE NQMLQIFIRS 180 YLVQPNPPLK RSFKMCTLIK SLGKSKHNS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.5S8T1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HQ637178	0.0	HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020997266.1	1e-106	protein FAR1-RELATED SEQUENCE 5-like
Refseq	XP_020997362.1	1e-106	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444YSY6	1e-110	A0A444YSY6_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	6e-12	FAR1 family protein