PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.60YE7
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family AP2
Protein Properties Length: 462aa    MW: 51781.9 Da    PI: 7.0729
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.60YE7genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.55.9e-12266319155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  s+y+GV++++++gr++A+++d    +  k+  + + g+ gt eeAa+a++ a+ k++g
  Araip.60YE7 266 SQYRGVTRHRWTGRYEAHLWD----NscKKeGQSRKGRQGTQEEAAEAYDIAAIKFRG 319
                  78****************999....33544577788999****************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.62E-18266328No hitNo description
PfamPF008476.5E-8266319IPR001471AP2/ERF domain
SuperFamilySSF541715.56E-12266327IPR016177DNA-binding domain
SMARTSM003803.2E-22267333IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-11267327IPR001471AP2/ERF domain
PROSITE profilePS5103216.7267327IPR001471AP2/ERF domain
PRINTSPR003675.4E-6268279IPR001471AP2/ERF domain
PRINTSPR003675.4E-6309329IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    Send to blast
MNHASTQMMK TLLDADTFVN LNNQNNIVGV PSHPSSSASV EAVLPPSFCC YYGVEGENVG  60
WYPPLPVLPL KSDGSLFDIE ALSRTKQQAP KLEDFFGGQS QECNNAREAL PLSYNMFHNP  120
NYLNHVQENI NLLQNQQHDV NQQHSSYYSS ASRNNNNHHQ VMLQGYNMVK EEVPGIHHAM  180
EAKLVVPLED NRGESLSIGS VAFGDLQSLR LSTSPSSQSS CVTTSQQASH AVMSTTKKRV  240
HDEMVEQNQK QIAHRKSIDT FGQRTSQYRG VTRHRWTGRY EAHLWDNSCK KEGQSRKGRQ  300
GTQEEAAEAY DIAAIKFRGV NAVTNFEIIR YDVEKIMASN DLLSIEQARR KREVIVNNNH  360
KPSTYDEESI LMHKSCKNPQ IMMINHPPTM ALEEESSSKI GTHISNEDKT GLPILYGRPS  420
TTAASTRLLA TIPTGWDQPP SHLRPNKLSL PQMPVFAAWT DA
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.60YE7
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFQ3817601e-40FQ381760.1 Vitis vinifera clone SS0ABG85YB10.
GenBankFQ3821411e-40FQ382141.1 Vitis vinifera clone SS0ABG6YB01.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016201594.10.0AP2-like ethylene-responsive transcription factor ANT isoform X1
RefseqXP_025652183.10.0AP2-like ethylene-responsive transcription factor ANT isoform X1
TrEMBLA0A444ZAP60.0A0A444ZAP6_ARAHY; Uncharacterized protein
STRINGGLYMA11G04910.29e-83(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3015122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.13e-33AP2 family protein