PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.67JA6
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 182aa    MW: 21049.2 Da    PI: 8.4502
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.67JA6genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR157.64.3e-1835115290
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                  +Y +YA++ GFs r+ + +ksk +g i+ ++  C kegk+++ +           etr++C+a l vk+  ++++ ++++ ++HnH+la
  Araip.67JA6  35 YYTRYATKKGFSFRMGRVTKSKIDGAIIGQEILCAKEGKEDRIHGV-------LDETRIDCQAILYVKRG-KDQYFISRFIKDHNHNLA 115
                  8**************************************9987766.......899*************9.99**************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.2E-1535115IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MDLDMNHHEI RMTLNEELEP YEVMDFPSMD DAKTYYTRYA TKKGFSFRMG RVTKSKIDGA  60
IIGQEILCAK EGKEDRIHGV LDETRIDCQA ILYVKRGKDQ YFISRFIKDH NHNLATLKIH  120
RKKTKIQKCL IDVLDESGLI PNKIAPILAT ESGGVENISF IQQDVINYLS RKRQKNLEKG  180
DV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.67JA6
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019429336.12e-49PREDICTED: protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A396JW003e-54A0A396JW00_MEDTR; Putative transcription factor FAR family
STRINGAES624145e-56(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1463426
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-29FAR1-related sequence 5