PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.6Z4YF
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 254aa    MW: 27919.3 Da    PI: 7.5026
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.6Z4YFgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.43e-1782132155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  + y+GVr++   ++Wv+e+r+p     +  r++lg++ t+e+Aa+a++aa ++l+g
  Araip.6Z4YF  82 PVYRGVRRRN-GNKWVCEVREPI----KkSRIWLGTYATPEMAARAHDAAVLALRG 132
                  68*****887.9******99962....35*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.7E-1282132IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-2883141IPR001471AP2/ERF domain
PROSITE profilePS5103221.23283140IPR001471AP2/ERF domain
SMARTSM003802.2E-2783146IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-2083142IPR016177DNA-binding domain
CDDcd000182.38E-2784142No hitNo description
PRINTSPR003671.9E-78495IPR001471AP2/ERF domain
PRINTSPR003671.9E-7106122IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MVYIYIPLFN TLACINQVSA IVMEFENNEE SLYYYSSSSS LSSSTSSQTQ RSAISPPPSS  60
SSPSRSQKRR SGRKKFREMR HPVYRGVRRR NGNKWVCEVR EPIKKSRIWL GTYATPEMAA  120
RAHDAAVLAL RGTSATFNFP LSVPLLPLAE SSSPQHIREA ASKAAQQTSN NDITNPPVSS  180
SNMNLCVGVD DGGGSGGVGS ISSTTFFDEE AMFNMPALLD SMAEGLLITP PSMKRGAFHD  240
DDEFQTDLTL WNFD
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00557DAPTransfer from AT5G51990Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.6Z4YF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016167941.20.0dehydration-responsive element-binding protein 1F-like
TrEMBLA0A444Y7N90.0A0A444Y7N9_ARAHY; Uncharacterized protein
STRINGGLYMA11G19341.12e-73(Glycine max)
STRINGXP_007132398.12e-73(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24333224
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.14e-42C-repeat-binding factor 4