PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.72AWG
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 584aa    MW: 62622.3 Da    PI: 9.3954
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.72AWGgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.94.6e-08200228129
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIar 29 
                      r++W++eEd +l  av+++G g+W+  a+
      Araip.72AWG 200 RKAWSEEEDIQLRAAVQRFGEGNWANMAK 228
                      789*********************99886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.12195240IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.601.9E-9197240IPR009057Homeodomain-like
SuperFamilySSF466891.65E-7198243IPR009057Homeodomain-like
SMARTSM007170.0018199252IPR001005SANT/Myb domain
PfamPF002495.7E-7200240IPR001005SANT/Myb domain
CDDcd116603.01E-9201241No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 584 aa     Download sequence    Send to blast
MPEKSRKVPF TEQDSAKLLE RYDATTVLTL LQELAHYPHA KIDWNELVKN TSTGISTARE  60
YQMVWRHLAY RHALAENLED GAQPLDDDSD LECELEVSPP VSAEAVSEAA ACMKVMIASR  120
TLSESTPSSS TIEAPLTITV PVCRGSGTPS GSSQSSKLMQ GMNVIFPVTV QRQTLPTAPS  180
TDGVETKGLG GGNMASKRKR KAWSEEEDIQ LRAAVQRFGE GNWANMAKGD NFPIKRSPTQ  240
LAQVRMSGYN PVFPGSNPGN GRWSILRKKD GTANSGTIVT STTYTTAEQL ATRHSLSLAL  300
DMPFKKLTAP GTADQAKTSL TSKTQVQHNA TATTIQSSLP PHQQSMLRGN PTPNPALKAT  360
AVAVGARVVS QSNIASQIKV AQARNAVPGT SISLAKPSTS AGMSSESEVQ ARTSSSVAHV  420
PPQSVRIPSQ SAPAPSQSTA PITSPSSCSS TVKAASSTVP VLPEKDKPVT PVVNKVPIKQ  480
EVNTTDELRN SKPSPAPKEM VQNDEKSTQD KSMNIPVKER VTSLVGSTRK EEVAEDKAVP  540
KNQVKSEDDG NKGSHDLDKE KSKISINGRS QDQKMDEKQE NLQN
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.72AWG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150355e-34AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016163721.10.0flocculation protein FLO11 isoform X2
RefseqXP_025666689.10.0flocculation protein FLO11 isoform X2
TrEMBLA0A445C9C50.0A0A445C9C5_ARAHY; Uncharacterized protein
STRINGGLYMA06G10170.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31223256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.12e-49MYB_related family protein