PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.72GC8
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 354aa    MW: 39988.7 Da    PI: 7.4199
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.72GC8genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR150.85.3e-1685174189
         FAR1   1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                  kfY +YAk+vGF +++++++     k+++  +++  + ++eg+re++ ++   + r +  t t Cka++ v +++ ++ w+v++lel H+H++
  Araip.72GC8  85 KFYANYAKKVGFVTKIRNTNFDktrKESKIPVNQSIYYTREGYRESRVNA---ATRANRITATRCKARMYVVLDNeNECWVVSRLELRHSHPC 174
                  6***********99998887664445555567899999********9988...899999*************99999**************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.0E-1385175IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MAFSPTEEGS ITTFTNPTLG DEQFNMDESD IQEQVGCKFD EITNVVVTRK DELDDGGQLP  60
DHSGIGEEEI PVVGMSFGSL PLAQKFYANY AKKVGFVTKI RNTNFDKTRK ESKIPVNQSI  120
YYTREGYRES RVNAATRANR ITATRCKARM YVVLDNENEC WVVSRLELRH SHPCSAEKAV  180
HYHEYRELTM HANHDVARSD ESNNLFRHLC SEFYNVAQEF VACDEEAAIL RVALWDAKSK  240
LIDYRASMRS NTAAASQNTV PTQSTGGAVV HDIQGPSRVK TKGRPKGKRL GAELDKSIKK  300
SMQKRNRKSH PDEVHLPSDN DHHGSLNKRC EDSTMWNSSE GGGFMHLLNS FRHI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.72GC8
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025636048.11e-134protein FAR1-RELATED SEQUENCE 6-like
TrEMBLA0A445EFJ00.0A0A445EFJ0_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1363727
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.22e-08FAR1 family protein