PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.73IW9
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Dof
Protein Properties Length: 361aa    MW: 38366.7 Da    PI: 9.2219
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.73IW9genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.47.7e-3967124360
       zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 
                  +++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk+
  Araip.73IW9  67 SENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKN 124
                  57899***************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027018.7E-3369124IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.54470124IPR003851Zinc finger, Dof-type
ProDomPD0074787.0E-2570121IPR003851Zinc finger, Dof-type
PROSITE patternPS01361072108IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MIQELFAGAG FVAPPDKKYS INNNNLISNN GGGGGGGGLL LPPAPPSSSS SSTPTSTVVA  60
ATSSNSSENL RCPRCDSSNT KFCYYNNYNL TQPRHFCKTC RRYWTKGGAL RNVPIGGGCR  120
KNKNIGVSNS SAAKAASATP KMKAMVASEL RRSSSSPLGI DHHDLPAGPI LWGSPQNSHL  180
LALLRAGQSQ NPNPNPNSML MNGVSVKEER NYNMVSSTAV EPLMMNNNIP RTTLGYDGVG  240
VGHIPQLDLC SSLWRSNNNN NQEHQPAAAA TSFLLSEQHQ TSSNGIQQLY HKLRSTPNNY  300
ATHNNSSPIF MPNMAASSSS SSLSTILESS SVSTAELGCW NNPTLPWLSD LPAATNGAYP  360
N
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.73IW9
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP6629111e-55KP662911.1 Cajanus cajan Dof7 (Dof7) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016201767.10.0dof zinc finger protein DOF1.1
RefseqXP_025652798.10.0dof zinc finger protein DOF1.1
TrEMBLA0A444ZA140.0A0A444ZA14_ARAHY; Uncharacterized protein
STRINGXP_007156842.11e-99(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF72193247
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07640.11e-32Dof family protein