PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.75CSJ

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Trihelix

Protein Properties

Length: 86aa MW: 10095.4 Da PI: 9.3657

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.75CSJ	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	42.3	2e-13	14	51	1	38
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm 38 rW++qe+l L+e+r+++++++r++++k+plW e+s+++ Araip.75CSJ 14 RWPRQETLSLLEIRSRLDSKFRENNQKAPLWNEISRFL 51 8**********************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 86 aa Download sequence Send to blast
MDKGWLAFDT GTNRWPRQET LSLLEIRSRL DSKFRENNQK APLWNEISRF LFVFAKHSFI 60 ENDMALLTAI TRRSIFVQET NSADSS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.75CSJ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025620018.1	9e-26	trihelix transcription factor PTL
TrEMBL	A0A444XSK9	2e-24	A0A444XSK9_ARAHY; Uncharacterized protein
STRING	GLYMA20G32940.1	6e-23	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21094	3	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10000.1	1e-17	Trihelix family protein