PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.75PTZ
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 275aa    MW: 31806.9 Da    PI: 8.549
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.75PTZgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR150.19e-1651136190
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  kfY++YAk +GFs+r+++++k+   +ei+++  +Cs+egk +++ +    +++ +++   +C a++ ++  k  g w ++k+ l+H+ +++
  Araip.75PTZ  51 KFYRNYAKAAGFSTRVRSTNKK--GNEIKNQLITCSREGKWKSKISP---TEKINSTAGLNCPARIYIHTLKdVGAWIISKVMLDHSQPCC 136
                  6****************98887..8889*************999877...778889999*********998879************98776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.0E-1351137IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MDDSTSDCQL NQGEVDFEFE SNEVPEPLSV VDYQFVPKVG MTFSALEDAG KFYRNYAKAA  60
GFSTRVRSTN KKGNEIKNQL ITCSREGKWK SKISPTEKIN STAGLNCPAR IYIHTLKDVG  120
AWIISKVMLD HSQPCCPSKA KMLKHHRELS MSIRRTIENN EEADLYEDHH IWVPIYLDHH  180
FWAGMRSTQR SESMYSFFNK FITRNSSLIQ FVKQYDNCLR SREQAERESY AADFHTVIPC  240
ATKSSIEAQF QDVYTHQKFR KVQAQFRGKA NCITR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.75PTZ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371781e-177HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020997160.11e-103protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020997362.11e-103protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444YSY60.0A0A444YSY6_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.12e-15FAR1 family protein