PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.76FUN
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 404aa    MW: 46406.6 Da    PI: 5.4846
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.76FUNgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1531.1e-1699184290
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  fY+ YAk+ GF vrk+k  ++ rn+ +t+++f     g+ ++  +   ++r+++aetr+gC+ ++ v+ +  +g+w ++ ++  HnH+l 
  Araip.76FUN  99 FYSLYAKMNGFAVRKNKIWRNVRNE-VTQQEFGFRGMGSVNDGMQ---RKREPKAETRCGCEVEMCVHVHFeSGRWIISYFQDVHNHKLL 184
                  9********************7776.******9888888777655...59********************99****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.6E-1499184IPR004330FAR1 DNA binding domain
PROSITE profilePS509668.024318366IPR007527Zinc finger, SWIM-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MEEESVADEC YRPLSAEEEG GDGSDAFGPG GDEFGDEFED GELGVESDAE DNFGDSFFDK  60
WEERAVDSIA ELGCINFKEI TAKEILMCHF LDRSVAFLFY SLYAKMNGFA VRKNKIWRNV  120
RNEVTQQEFG FRGMGSVNDG MQRKREPKAE TRCGCEVEMC VHVHFESGRW IISYFQDVHN  180
HKLLDDRLTF MLSGHRKMDA ATLEQMNMMP RVGIKTPQIY SSFVQTARGF QNLSFLKRDM  240
DFVEQFMRCI SQMRSREAHS DLLSMVGEPV LQSPFHDLER SAAKKLTRAI FFNFRPMLFR  300
ACTLKVRTHT WSQTSDTFTL SRSANARREW QVCHYGDSNN FKCSCLRMES LGIPCDPIVA  360
VLVHLEMTDI PDSLVLDHWS KSARSKVRAF VEKGLFCWDI SANI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.76FUN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015964117.11e-144protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445CK011e-180A0A445CK01_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3613639
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.14e-11FAR1-related sequence 10