PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.76HPU

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 130aa MW: 14855.9 Da PI: 5.1922

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.76HPU	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	32.6	2.6e-10	82	126	48	91
FAR1 48 tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 t+++r ++etr+gC a+++v+ + ++ w+ t +++eHnHel+p Araip.76HPU 82 TNRKRALKPETRCGCVAQMRVHIDVgRDWWYKTLFQNEHNHELMP 126 6788999***************99999999*********86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	9.6E-8	75	126	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 130 aa Download sequence Send to blast
MVDMIGESSH NQIENVSAEE MEELLVDSDG NDVENLIGRV NFVSLSVNMA NKYTLMLPRP 60 FTMHLGGSMD FQKFKVGGVD ETNRKRALKP ETRCGCVAQM RVHIDVGRDW WYKTLFQNEH 120 NHELMPPTLS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.76HPU

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016181559.2	5e-58	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444XR99	2e-93	A0A444XR99_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF30184	2	2