PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.78HJ7
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 413aa    MW: 44795.7 Da    PI: 9.5253
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.78HJ7genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.41.1e-12341386655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++Er RR ri +++ +L+el+P+     +k  + a++L +Av+YIk+Lq
  Araip.78HJ7 341 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVDYIKDLQ 386
                  689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.25335385IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.98E-16338399IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.71E-12339388No hitNo description
Gene3DG3DSA:4.10.280.101.5E-14340397IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-9341386IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.1E-11341391IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048573Biological Processphotoperiodism, flowering
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MDSNSLQGYQ LEQQQSSSSG LLRYRSAPSS LLANLTPTFT ESQALLSRLA NSNSSSSKNN  60
ISKNDTVSHS FQEFPDTNTN TNTKTNNKGC DSKGLRRMNS GGRGYGGGGG LPPHYPRNTS  120
SSSSSSCSSS MDGSLGLVMG SMGMDQKGFG VSSSLNLLRQ NSSPADLFSN VSFQNGFATM  180
KGVGNYGHVN STSEELSPSM NRLKNQISFS SRTASSLGML SQISEIGNEE IGANSPEDGR  240
QGGSNGDALH YSPGFCYGSW SDAPQHSENL TGLKRGRSSN GKLFPDVQNG ELGNQVHMLS  300
HHLSLPKTSS EMIGMENLLQ FPDSVPCKIR AKRGCATHPR SIAERVRRTR ISERMRKLQE  360
LVPNMDKQTN TADMLDLAVD YIKDLQKQFK NLSEKRANCK CISMRRADTN QIV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1100108GGRGYGGGG
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00308DAPTransfer from AT2G42280Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.78HJ7
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016183619.10.0transcription factor bHLH130
RefseqXP_025633295.10.0transcription factor bHLH130 isoform X1
TrEMBLA0A445AIB90.0A0A445AIB9_ARAHY; Uncharacterized protein
STRINGGLYMA02G29830.11e-173(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51773253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.16e-79bHLH family protein