PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.7A2UP

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 94aa MW: 10550.8 Da PI: 5.1363

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.7A2UP	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	27.4	1.1e-08	57	94	1	40
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegk 40 kfY++YAk +GFs+r+++++k+ +ei+++ +C kegk Araip.7A2UP 57 KFYKDYAKAAGFSTRVQTTNKK--GNEIKNQLITCRKEGK 94 6**************98887..8889********97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	5.9E-6	57	94	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 94 aa Download sequence Send to blast
MDDSTSDCQL NQGKVDFEFE SNEVPETFGN SRPLCVVDDQ FVPKVGMTFN TLEVAAKFYK 60 DYAKAAGFST RVQTTNKKGN EIKNQLITCR KEGK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.7A2UP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020958614.1	1e-42	uncharacterized protein LOC110262592
TrEMBL	A0A444YGT8	8e-47	A0A444YGT8_ARAHY; Uncharacterized protein
TrEMBL	A0A445C251	2e-47	A0A445C251_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477