PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.7QQ9G
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 359aa    MW: 42977.8 Da    PI: 7.2496
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.7QQ9GgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.11.4e-12895196
                 EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
           B3  1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
                 ffk+l+   ++++  l +pk f++e+  g++ +   ++l+ ++  + +v+  ++k+ ++++l++GW++ vk+ gL+   f++F +++rs+f   vk+
  Araip.7QQ9G  8 FFKILV--QSFQH-ELKIPKAFVKEYwRGVS-N--PIVLKLPNTLKQRVYW-IQKNEDEIWLEEGWEQVVKDFGLEHSQFLTFDYKRRSCF--EVKI 95
                 778884..44444.489*********95562.3..4999999999999999.5899999***************************99***..5554 PP
2B3469.5e-15269355695
                  ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
           B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                    s+v++++ + +p +f ++h   +e+++ +++ +   r W+v ++ ++++ r   + l++GW +F ++n+L +gD++vF+l+++  +++ v+
  Araip.7QQ9G 269 QESYVGSTC-VAIPATFERKHL--EEGPIRMIVGN---RAWTVCYKTWRGRARyrkHKLQSGWLRFRRENNLAVGDVCVFELTSEFPQTMIVR 355
                  357777777.********9995..34665666555...99999998877777667799***********************987644445554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508638.811599IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.9E-13797IPR015300DNA-binding pseudobarrel domain
SMARTSM010191.2E-11899IPR003340B3 DNA binding domain
CDDcd100171.12E-9897No hitNo description
SuperFamilySSF1019362.35E-148105IPR015300DNA-binding pseudobarrel domain
PfamPF023625.1E-10895IPR003340B3 DNA binding domain
SuperFamilySSF1019369.81E-10109203IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.102.6E-9110201IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508637.387110202IPR003340B3 DNA binding domain
SMARTSM010190.0034112202IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.107.7E-15258347IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.33E-15259357IPR015300DNA-binding pseudobarrel domain
CDDcd100174.23E-12262356No hitNo description
PROSITE profilePS5086310.01263359IPR003340B3 DNA binding domain
SMARTSM010191.1E-4264357IPR003340B3 DNA binding domain
PfamPF023624.8E-12269356IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MTLYERGFFK ILVQSFQHEL KIPKAFVKEY WRGVSNPIVL KLPNTLKQRV YWIQKNEDEI  60
WLEEGWEQVV KDFGLEHSQF LTFDYKRRSC FEVKIYPMND SEIMPPHHQI CFFQVLVHNK  120
FHQKLMVPKG ANEYWKRISN PIKLVLPYGV ERKVNWTKRG ENIWLEQGWK KVVELCGLSY  180
EWLLTFDYNG MSRFEVKVYD TTTLRVAYYK EYDVENNKDV DETENDDDDD DDDDDDDDDD  240
EFVQEHFKRK KTNKVNGSNR NPSFKIRIQE SYVGSTCVAI PATFERKHLE EGPIRMIVGN  300
RAWTVCYKTW RGRARYRKHK LQSGWLRFRR ENNLAVGDVC VFELTSEFPQ TMIVRVQSG
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.7QQ9G
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016196734.20.0B3 domain-containing protein At5g18090-like
TrEMBLA0A444XAN40.0A0A444XAN4_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3004022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.18e-11B3 family protein