PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.7Z70C

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 374aa MW: 43473.8 Da PI: 4.8769

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.7Z70C	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	26	3e-08	4	45	50	90
FAR1 50 kerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 + r++++etr+gC kl++ ++ ++ w+v ++ eHnHel+ Araip.7Z70C 4 RVREPKPETRCGCMSKLHIFFDTvTESWVVRDFCDEHNHELV 45 678999************9999**************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.9E-5	3	45	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence Send to blast
MKNRVREPKP ETRCGCMSKL HIFFDTVTES WVVRDFCDEH NHELVVPKLA RMLRSHKKMT 60 EPDTNFKSST GQPVMQTHFQ QLERSTATIY TQKIFMLFRS MLHKASTLKV IYEKEMSSCK 120 IYQVSKCYNP NMIWHVFFHE EQDEFKYSCM RMDSIGIPCS HILVILGFLD IAELPKSLVL 180 RRWTRKAKEG ISGYDDMGGL MEDSLAISRR ACLAHWCKQI MNEGCLKGDP FNESRDALVN 240 ILSWIRAHSG DNNMEEHAEY MYEDLAKNGS TEIETTRKPK RCSYCRKGGN NIATCSVRKM 300 DERTPQFDDD AEENIEGEDY SFVDAESDGY VHTEWFEEED EYLDSSRYYE QSGGETESSM 360 DYDSGANDDD EVEL

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence Send to blast

MKNRVREPKP ETRCGCMSKL HIFFDTVTES WVVRDFCDEH NHELVVPKLA RMLRSHKKMT  60
EPDTNFKSST GQPVMQTHFQ QLERSTATIY TQKIFMLFRS MLHKASTLKV IYEKEMSSCK  120
IYQVSKCYNP NMIWHVFFHE EQDEFKYSCM RMDSIGIPCS HILVILGFLD IAELPKSLVL  180
RRWTRKAKEG ISGYDDMGGL MEDSLAISRR ACLAHWCKQI MNEGCLKGDP FNESRDALVN  240
ILSWIRAHSG DNNMEEHAEY MYEDLAKNGS TEIETTRKPK RCSYCRKGGN NIATCSVRKM  300
DERTPQFDDD AEENIEGEDY SFVDAESDGY VHTEWFEEED EYLDSSRYYE QSGGETESSM  360
DYDSGANDDD EVEL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.7Z70C

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015939454.2	0.0	protein FAR1-RELATED SEQUENCE 9-like isoform X1
Refseq	XP_020958456.1	0.0	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444Z110	0.0	A0A444Z110_ARAHY; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	5e-13	FAR1-related sequence 7