PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.82L4V
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 413aa    MW: 47042.5 Da    PI: 5.4089
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.82L4VgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.1e-19212262256
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                   y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  Araip.82L4V 212 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 262
                  59******9.**********955...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.65E-34211271No hitNo description
Gene3DG3DSA:3.30.730.103.4E-32212270IPR001471AP2/ERF domain
SMARTSM003801.5E-40212275IPR001471AP2/ERF domain
PROSITE profilePS5103222.998212269IPR001471AP2/ERF domain
SuperFamilySSF541716.34E-23212270IPR016177DNA-binding domain
PfamPF008472.3E-12213262IPR001471AP2/ERF domain
PRINTSPR003676.9E-11213224IPR001471AP2/ERF domain
PRINTSPR003676.9E-11235251IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009651Biological Processresponse to salt stress
GO:2000070Biological Processregulation of response to water deprivation
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MDEANNNNKN SNSGSRFRNM GVDDDSDAHK VFDEMNDPTF FQRAQWKPVF DEASVLHNRP  60
LKKIRSPQRS SSLQQPLPSP SSSSSSSVPP SSQSSRIVFP FAFDPSQQNP MQMQFPYQYG  120
TRTDTPFMHP PMQPTTHNNQ MISFGSQSHH PQQQHNMNMV NTVYQPQMLQ QQNQQQILQY  180
WSEALNLSPR GRMMMMNNRL RPPSQPLNTT KLYRGVRQRH WGKWVAEIRL PRNRTRLWLG  240
TFDTAEDAAM AYDREAFKLR GENARLNFPE LFLNKKDDDN NDKNQEEAPS DAPTTSSPSS  300
SITTTKQVEE VSEGGNANVE KSPIEESNEN SRSVSEGVSQ ELVWGEMSAW FNAIPSGWGP  360
GSPVWDDLDT SNNSFLLQPQ VPFGLNNSNQ HQQQEQDGFN DNHDAADVHI QQD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-21211269160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.82L4V
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016172120.10.0ethylene-responsive transcription factor ERF054
RefseqXP_025672461.10.0ethylene-responsive transcription factor ERF054
TrEMBLA0A444Y6E50.0A0A444Y6E5_ARAHY; Uncharacterized protein
STRINGGLYMA12G33020.11e-112(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42683258
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.11e-47ERF family protein