PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.865PM
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 195aa    MW: 22558.6 Da    PI: 4.6383
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.865PMgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.35e-12144755
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 ++Er+RR+++ + f  L   +P +     kK +Ka+iL +A++Y+k+Lq
  Araip.865PM  1 MAERKRRQQLTQMFIALSATIPGL-----KKTDKASILGEAINYVKQLQ 44
                 58**********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.65E-10148No hitNo description
SMARTSM003531.1E-12149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-14157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.608143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-9144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.66E-16166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MAERKRRQQL TQMFIALSAT IPGLKKTDKA SILGEAINYV KQLQERVREL EKRNNDNKRG  60
PTEPVIFLNK TQLLCRNNED STSEEEEEEE EEEVEDWRSK EEKQVLPDVE ARMLEKEKEV  120
LIEIHCEKEN GIEVKILEQL ENLHLSVTGS SVLPFGNSTL GITIIAKMGD AYTMTLHDLL  180
TNLRQLLLNI DQQHY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
127ERKRRQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.865PM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016172246.11e-137transcription factor bHLH18
TrEMBLA0A151R5Q71e-71A0A151R5Q7_CAJCA; Transcription factor bHLH19
TrEMBLA0A371HHV43e-71A0A371HHV4_MUCPR; Transcription factor bHLH25 (Fragment)
STRINGGLYMA13G44594.12e-67(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF131101230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-36bHLH family protein