PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.8J51E
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 391aa    MW: 45787.2 Da    PI: 10.4076
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.8J51EgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1301.7e-091193191
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91
                 kfY++Y+k   Fs+++++++++ r++ i+++  +   + ++++       + +t+++  ++C a++ v+  k  + w+++k +l+H+H+++p
  Araip.8J51E 11 KFYKNYSKLSSFSTKIRNTTRK-RDE-IKNQLIRWEVKIQESP-------TLKTNPSAGINCPARIYVHILKdVNLWRISKAVLNHSHPCCP 93
                 6****************98887.333.4444443333322222.......2468***************988799**************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.9E-71193IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
MIFKTLEEAR KFYKNYSKLS SFSTKIRNTT RKRDEIKNQL IRWEVKIQES PTLKTNPSAG  60
INCPARIYVH ILKDVNLWRI SKAVLNHSHP CCPNREEMFK QHKELSMFVH HTIETNEEAR  120
IGPSKTYQSF ITAAGSHREL IYLDHHFWTG MRSTQRSESM HAFFNKFITR NISLSQFVKQ  180
YDNCLASREQ RIFTPCDTVH NKISNRGSVS ACLYPREVQG SSRTILRKGE LHHKISEFHP  240
RFHNVRSRRA VFCHLRRSIA RGKVSVPVVR VKGHTVPPFP ERLKLQVNNV ALKYIPEHWS  300
KNIKRRHTHI KSIQDEPLLE PRSKRFDDLV FRSHNICEFA SESEELTGIL HRAFDNLNLL  360
DGGSTIQSSS SRYNAPDMNY SGEDYRSFSF Y
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.8J51E
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015960283.19e-97protein FAR1-RELATED SEQUENCE 6-like
TrEMBLA0A445CA221e-125A0A445CA22_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.11e-08FAR1 family protein