PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.8TA01
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 197aa    MW: 21906.3 Da    PI: 4.3606
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.8TA01genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR126.62e-08149194143
         FAR1   1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkree 43 
                  ++YneY++  GFsvr+sk  ++     +gei+++ fvC +eg+r+ 
  Araip.8TA01 149 DYYNEYGRIKGFSVRRSKVGRRtkqGAEGEIIWQIFVCLREGERDG 194
                  69**************98766643367899************9975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.8E-6149194IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MPGQVGGGMH QKWVSIRDPC LPRVSNSYNS LMFRGCRLER HTAELEFCVF VVMIDNADPN  60
GFVEQSYEFS SNFDQVHASQ DADDGMSGET VPVEEAEAMD SSAADADIDV EAAVRIVDGI  120
GSFGVIEFSA LTANDVYTTE FTSLQAAYDY YNEYGRIKGF SVRRSKVGRR TKQGAEGEII  180
WQIFVCLREG ERDGKHM
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.8TA01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016192260.11e-79protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025639519.11e-79protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444WYT11e-95A0A444WYT1_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3290752