PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.95LB8
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bZIP
Protein Properties Length: 329aa    MW: 35743.1 Da    PI: 5.3343
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.95LB8genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.53.8e-15250311162
                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                  +ke kr +r+ +NR++A+  R+RKka++  Le++vk Le++N++Lk++l++l++e + l++ 
  Araip.95LB8 250 DKENKRLKRLLRNRVSAQQARERKKAYLIDLETRVKDLEKKNSELKERLSTLQNENQMLRQI 311
                  5899*****************************************************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.40.105.4E-2622113IPR013083Zinc finger, RING/FYVE/PHD-type
SuperFamilySSF578501.41E-2922107No hitNo description
PfamPF145691.0E-3326101IPR027934Cellulose synthase, RING-type zinc finger
PROSITE profilePS500898.5943682IPR001841Zinc finger, RING-type
SMARTSM003382.6E-16250314IPR004827Basic-leucine zipper domain
PfamPF001701.0E-13251312IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.691252315IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-16254314No hitNo description
SuperFamilySSF579598.13E-13254312No hitNo description
CDDcd147041.05E-21255306No hitNo description
PROSITE patternPS000360257272IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0009740Biological Processgibberellic acid mediated signaling pathway
GO:0010017Biological Processred or far-red light signaling pathway
GO:0010099Biological Processregulation of photomorphogenesis
GO:0010114Biological Processresponse to red light
GO:0010218Biological Processresponse to far red light
GO:0010224Biological Processresponse to UV-B
GO:0031539Biological Processpositive regulation of anthocyanin metabolic process
GO:0042753Biological Processpositive regulation of circadian rhythm
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003690Molecular Functiondouble-stranded DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MDQSGGIATG PRDVLGVRNG SDIGCKPLKN LNGKICQICG DTVGLTATGD VFVACQECSF  60
PLCHRCYECE CENGNQSCPQ CKTRYNSHKD SSHLEGDEDD YEDDDDVDDI ENEVNYGEGN  120
INTAGMQWEE DADLSSSSGH DSRMPNSNLH MTNRQPLSGE KPCATPDTKS VQATSGPLGP  180
LGPSKAHSLS YTDSKQPGLE SDEEVRRVPE IGGESAGPSA SRPGAGPTGG QERGQGTGDG  240
QRKRGRSPAD KENKRLKRLL RNRVSAQQAR ERKKAYLIDL ETRVKDLEKK NSELKERLST  300
LQNENQMLRQ ILKNTTASRR GSNSGTNAE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1weo_A2e-222694977cellulose synthase, catalytic subunit (IRX3)
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00117ampDAPTransfer from AT5G11260Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.95LB8
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016180986.10.0cellulose synthase A catalytic subunit 1 [UDP-forming]-like
RefseqXP_025682682.10.0cellulose synthase A catalytic subunit 1 [UDP-forming]
TrEMBLA0A444X3B60.0A0A444X3B6_ARAHY; Uncharacterized protein
STRINGGLYMA18G14750.11e-159(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF70643248
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.12e-40bZIP family protein